CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the JBrowse link in the Tools menu. Whole Genomes 2019-03: Gossypium barbadense AD2 Hai-7124 genome ZJU v1.1_a1 2018-12: Gossypium barbadense AD2 3-79 genome HAU v2_a1 2015-12: Gossypium barbadense AD2 3-79 genome HAU v1_a1 2019-03: Gossypium hirsutum AD1 genome ZJU-Improved v2.1_a1 2018-12: Gossypium hirsutum AD1 genome HAU v1_a1 2017-09: Gossypium hirsutum AD1 genome TX-JGI v1.1_a1 2015-04: Gossypium hirsutum AD1 genome NAU-NBI v1.1_a1.1 2015-04: Gossypium hirsutum AD1 genome CGP-BGI v1_a1 2018-05: Gossypium arboreum A2 genome CRI-Updated v1_a1 2014-05: Gossypium arboreum A2 genome CGP-BGI v2_a1 2012-12: Gossypium raimondii D5 genome JGI v2_a2.1 2012-08: Gossypium raimondii D5 genome CGP-BGI v1_a1 Chloroplast Genomes Gossypium arboreum chloroplast Gossypium barbadense chloroplast Gossypium hirsutum chloroplast Gossypium raimondii chloroplast Please watch the JBrowse tutorial for more details about how to navigate and use JBrowse.
- HTMLCottonGen JBrowse and User Manual