Data comprise meteorological measurements (mean, minimum and maximum daily air temperature, minimum and maximum daily relative humidity, wind speed (kilometres per second at 10metres height), dew point temperature, estimated actual vapour pressure, precipitation, estimated surface resistance, estimated albedo and estimated Potential evapotranspiration (PET)) for the Siksik catchment, North West Territories, Canada for 2013 and 2014. The data were collected under Project HYDRA, a NERC funded UK research project linking Heriot Watt University, the Universities of Durham, Aberdeen and Stirling, and the Centre for Ecology & Hydrology (CEH), Edinburgh. Project HYDRA is part of the UK Arctic Research Programme. Project HYDRA studies sites in Arctic Canada to investigate the biological, chemical and physical controls on the release of greenhouse gases from permafrost into melt water and to the atmosphere and how these emissions will influence global warming.