The Integrated Source Apportionment Method (ISAM) has been revised in the Community Multiscale Air Quality (CMAQ) model. This work updates ISAM to maximize its flexibility, particularly for ozone (O3) modeling, by providing multiple attribution options, including products inheriting attribution fully from nitrogen oxide reactants, fully from volatile organic compound (VOC) reactants, equally from all reactants, or dynamically from NOx or VOC reactants based on the indicator gross production ratio of hydrogen peroxide (H2O2) to nitric acid (HNO3). The updated ISAM has been incorporated into the most recent publicly accessible versions of CMAQ (v5.3.2 and beyond). This study’s primary objective is to document these ISAM updates and demonstrate their impacts on source apportionment results for O3 and its precursors. Additionally, the ISAM results are compared with the Ozone Source Apportionment Technology (OSAT) in the Comprehensive Air-quality Model with Extensions (CAMx) and the brute-force method (BF). This dataset is associated with the following publication: Shu, Q., S. Napelenok, W. Hutzell, K. Baker, B. Henderson, B. Murphy, and C. Hogrefe. Comparison of ozone formation attribution techniques in the northeastern United States. Geoscientific Model Development. Copernicus Publications, Katlenburg-Lindau, GERMANY, 16(8): 2303–2322, (2023).