OwnerUnited States Department of Agriculture - view all
Update frequencyunknown
Last updated10 months ago
Format
OverviewBEASTBayesian statisticsInfluenza A virusNP103Swineevolutionmolecular substitution rateneuraminidasephylogeneticrate of evolution
These are the '.log' files from 'Characterizing a century of genetic diversity and contemporary antigenic diversity of N1 neuraminidase in Influenza A virus (IAV) from North American swine' generated in BEAST and used to plot molecular substitution rates and calculate statistical distances between posterior distributions of these rates. The names of these files communicate information about the various BEAST runs using the following format: cladeOrLineageName_replicate_substitutionModel_treePrior_MCMCiterations_dateOfRunWithin2021.log where replicate is not always included
Additional Information
KeyValue
dcat_modified2023-06-26
dcat_publisher_nameAgricultural Research Service
guid2a3151c9-d7df-4872-bd75-0516376b664a
language
harvest_object_idd3de97af-aba2-4b6a-8efb-42527c18a9f6
harvest_source_id2c0b1e04-ba48-4488-9de5-0dab41f9913f
harvest_source_titleUSDA Open Data Catalog
Files
- ZIPBEAST log file for clade N1.C.2.1
- ZIPBEAST log file for clade N1.C.2
- ZIPBEAST log file for clade N1.C.3.1
- ZIPBEAST log file for clade N1.C.3.2
- ZIPBEAST log file for clade N1.C.3
- ZIPBEAST log file for clade N1.P
- ZIPBEAST log file for the classical swine N1 lineage